Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1twiA_HHsearch_TS5.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1twiA_HHsearch_TS5.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1twiA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 1.0 (Target length: 365, Aligned residues: 365)
RMSD: 1.14
TM-score: 0.98223
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
MLGNDTVEIKDGRFFIDGYDAIELAEKFGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMMRPAMYEAYHHIINCKVKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAKDIVPPHLL
:::::::::::::::::::::::::: :: ::::::::::::::::::::::::::::::::::::::::: :::::::::: ::::::::::::::: :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: : :: :::::::::::::::::::::::::: :::::::::::::::::::::::::: .. :: :::::::::: :: :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::..
--------------------------MIETPYYLIDKAKLTRNMERIAHVRE-KS-----GAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRER-FGKETHAYSV-AYGDNEIDEVVSHAD-KIIFNSISQLERFADKAA----GIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVER--V--MD-----RINGFMIHNNCENKDFGLFDRMLGEI---EERFGALIARVDWVSLGGGIHFTGDD--YP-VD-AFSARLRAFS--DR---YGVQIYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLLIYRETAKVL--PNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSLS------