Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1tufa_spk2_TS2.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1tufa_spk2_TS2.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1tufA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.99452055 (Target length: 365, Aligned residues: 363)
RMSD: 1.52
TM-score: 0.96098
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
FLGNDTVEIKDGRFFIDGYDAIELAEKFGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMMRPAMYEAYHHIINCKVKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAKDIVPPHLL--
:: :: ::::::::::::::::::::::::: ::: ::::::::::::::::::::::::::::::::::::: :::::::::: ::::::::::::: :::::::::::::::::: : ::::::::::::::::::::::::::::::::: :::::::::: :::::::::::::: : :::::::::::::::::::::::::::::: :: ::: :::: : :::::::::::::: ::::::::::::::::::::::::::::: ::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. .
-------------------MI--ET-----PYYLIDKAKLTRNMERIAHVREKSG----AKA-LLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRER-FGKETHAYSV-AYGDNEIDEVVSH-ADKIIFNSISQLERFADK-A---AGIARGLRLNPQVSSSSFDLADPARPFSRLGEW----DVPKVERVMD-----RINGFMIHNNCENK-D--FGLFDRMLGEIEERFGALIARVDWVSLGGG-IH-FTG--DDYP---V-DAFSARLRAFSDRY-GVQIYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLL--IYRETAKVLPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQ-S-------LS