Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1tufa_sp3_TS2.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1tufa_sp3_TS2.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1tufA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.9972603 (Target length: 365, Aligned residues: 364)
RMSD: 1.14
TM-score: 0.9737
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
FLGNDTVEIKDGRFFIDGYDAIELAEKFGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMMRPAMYEAYHHIINCKVKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAKDIVPPHLL-
:::::::::::::::::::::::::: :: ::::: ::::::::::::::::::::::::::::::::::: ::::::::::: :::::::::::::: :::::::::::::::::: ::::::::::::::::::::::::::::::::: :::::::: :: ::: ::::::::::: : :::::::::::::::::::::::::::::: :: ::: ::::::::::::::::: :: ::::::::::::::::::::::::::::: :::::::::::::::::: : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
--------------------------MIETPYYLIDKAKLTRNMERIAHVRE-KS---GAKAL-LALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRE-RFGKETHAYSV-AYGDNEIDEVVSHA-DKIIFNSISQLERFADKA----AGIARGLRLNPQVSSSSFDLADPARPFSRLGEW-----DVPKVERV--MD-RIN-GFMIHNNCENK-D--FGLFDRMLGEIEERFGALIARVDWVSLGGG-IH-FTG--DDYPVDAFSARLRAFSD-RY----GVQIYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDL-L-IYRETAKVLPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSL-------S