Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_1knwa_sp3_TS1.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_1knwa_sp3_TS1.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 1knwA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.969863 (Target length: 365, Aligned residues: 354)
RMSD: 2.07
TM-score: 0.91521
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
PHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAAL-----KQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGS-GVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHA-PTVE--TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDN-GQARLIRRRQTIEELLALELLHH-
                     :::::::::::::::::::::     :::::::::::::::::::::::::::::::::::::::::   ::   :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  ::::::::::  :: : :::::::: ::::::::::::::::::::::::::::::::::::::    .:::::::::::::::::::      ::::::::::::::::::::::::::::: .:::::::::::::::.     . ::::     .::.. ...:  .::::::::::::::::.    .:: . ::: ::::::::::::::::::::::::::::::::: ::::::::::::::....      
---------------------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGR---ER---FGKETHAYSVAYGDNEIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEW--DVPKVERVMD--RI-N-GFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTG----DDYPVDAFSARLRAFSDRYG------VQIYLEPGEASITKSTTLEVTVLDTLYNG-KNLAIVDSSIEAHMLDL-----L-IYRE-----TAKVLPNEGSHSYMICGKSCLAGDVFGEFR----FAE-E-LKV-GDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSL-----S