Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1knwa_sp3_TS1.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1knwa_sp3_TS1.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1knwA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.969863 (Target length: 365, Aligned residues: 354)
RMSD: 2.07
TM-score: 0.91521
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
PHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAAL-----KQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGS-GVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHA-PTVE--TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDN-GQARLIRRRQTIEELLALELLHH-
::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: :: : :::::::: :::::::::::::::::::::::::::::::::::::: .::::::::::::::::::: ::::::::::::::::::::::::::::: .:::::::::::::::. . :::: .::.. ...: .::::::::::::::::. .:: . ::: ::::::::::::::::::::::::::::::::: ::::::::::::::....
---------------------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGR---ER---FGKETHAYSVAYGDNEIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEW--DVPKVERVMD--RI-N-GFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTG----DDYPVDAFSARLRAFSDRYG------VQIYLEPGEASITKSTTLEVTVLDTLYNG-KNLAIVDSSIEAHMLDL-----L-IYRE-----TAKVLPNEGSHSYMICGKSCLAGDVFGEFR----FAE-E-LKV-GDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSL-----S