Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1knwA_COMA_TS9.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1knwA_COMA_TS9.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1knwA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.9808219 (Target length: 365, Aligned residues: 358)
RMSD: 1.01
TM-score: 0.96275
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
PHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGA-MVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAM-YGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELLHH
:::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: :: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : ::: : ::::::::::::::::::::: ::::::::::::::::::::::::: : ::::::::::::::::::: :::::::::::::::::::::::::::: ::::::::::::::::::: :::::::::. : : ::::::::::::::::::: : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :.:
---------------------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERF-GK-----ETHAYSVAYGDNEIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERV--M--DRI-N-GFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTG---D-DYPVDAFSARLRAFSDRYG------VQIYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLLIYRETAKVLPN------E--G-SHSYMICGKSCLAGDVFGE------F-RFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQ-SLS--