Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_1hkva_sp3_TS3.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_1hkva_sp3_TS3.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 1hkvA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.9917808 (Target length: 365, Aligned residues: 362)
RMSD: 1.47
TM-score: 0.95665
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMS-DNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAG-NARLVLRRETVDDLLSLEVR
                                   ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: ::::::::::: ::::::::::::::: ::::::::::::::::::    ::::::::::::::::::::::::::::::::     ::::::::: :   ::::::::::::::::::::::::::::::::::       : :::::::::: :: ::: .::: :  :  :::::::::::  :: :::::::::::::::::::::::::::::      :::::::::::: ::::::::::::::::   :.  :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: ::::::: :::::::: :..
-----------------------------------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRE-RFGKETHAYSV-AYGDNEIDEVVSHAD-KIIFNSISQLERFADKAA----GIARGLRLNPQVSSSSFDLADPARPFSRLGEW-----DVPKVERVM-D---RINGFMIHNNCENKDFGLFDRMLGEIEERFGALI-------A-RVDWVSLGGG-IH-FTG-DDYP-V--D--AFSARLRAFSD--RY-GVQIYLEPGEASITKSTTLEVTVLDTLYN------GKNLAIVDSSIEAHMLDLLIYRETAKVLP---NE--GSHSYMICGKSCLAGDVFGE-FRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVRE-FTYADYEQ-SLS