Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1f3tA_HHsearch_TS7.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1f3tA_HHsearch_TS7.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1f3tA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.91780823 (Target length: 365, Aligned residues: 335)
RMSD: 1.23
TM-score: 0.8965
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
RFLEGFNTRDALCKKIS--GDPFFVADLGDIVRKHETWKKCLP--RVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIST----------------VKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPGRYYVASAFTLAVNVIAKKVTQSFM-YYVNDGVYGSFNCILYDHAVVRPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRELKS---------
:::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: ::::::::::: :::::::::::::::: :::::::::::::::::::::::::::: :::::::::::::: : ::::::::::::::::::::::::::: : ::::::::::::::::::::::::: :::::::::::::::::: :::::::::::::::::::::::::::: ::. ::::::::::::::::::::::::. .: . ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
-----------------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGR-ERFGKETHAYS-VAYGDNEIDEVVSHAD-KIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERV--M----DRINGFMIHNNCENKDFGLFDRMLGEI--E-ERFGALIARVDWVSLGGGIHFTGDD-YPVDAFSARLRAFSDRYG-----VQIYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLLIYRETAKVLP--NE---G-SHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIREL-DGSVRTVREFTYADYEQSLS