Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1fqva_sp3_TS1.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1fqva_sp3_TS1.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1fqvA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.90625 (Target length: 320, Aligned residues: 290)
RMSD: 2.14
TM-score: 0.84219
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
VSWDSL--PD-ELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQ-NLSLE-GLRLSDPI-----VNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQL-----NLSGYRKNLQKSDLSTLVRRCPNLVHLD-L---SDSV----------MLKNDCFQEFFQLNYL-QHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ
:::. . ..: :::::::::.:::::::::.:::::::::::::: : ::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: ::::: :::::::: ::::::::::::::::::: : : ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: : :::: :::: ::::::::::: :::::::::::::::::::::::::::::::: ::::::::::::: :::. : :::::::::::.
MKSS--HHT-LRCQ-STLLKAIFFVLLISANASLIIRRMEQPTEPGYYC-N--NKRYLLKEVEAAREAACRGFSSTSENARRPVVHTEDDNVENLM-FEWPLPPSKAQKVKGQGGNFKGNIIFNNSCELKAVIYYNHKSNQYEPCQKVPEVSISTNS-G----K-KQVSKKPSVQCGSLSWEIEEIQQLAFYDFYNSQHKLVEVKYTSDQVDGPWKRGSMMKIVRICNRGKFLQSTRTNNFLKFCKAHEVHFDIVISIKD-EVRGIVVKHHIWRYQTMAKDFDKNKNKMSAMEKKPETQIISLVC-LYDNIFPLFPPTL-IPNV--S--NSRKRKTLANAR--------------