Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_3dfua_sp3_TS7.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_3dfua_sp3_TS7.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 3dfuA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.8333333 (Target length: 234, Aligned residues: 195)
RMSD: 2.84
TM-score: 0.67818
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
QAPRLRVGIFDD------GSSTVNAE---------------KLDSVGHYVTVLHAPEDIRDFELVVIDAHGVEGYVEKLSAFARRGQFLHTSLTHGITVDPLETSGGIVSAHPIGQDRWVASALDELGETIVGL--LVGELGGSIV--------EIAD-DKRAQLAAALTYAGFLSTLQRDASYFLDEFLGDPDVTSDIVDSAQQFQALPSLDEVIAQYDSINNPGRQRLFRD-LARRQAEISRAQDIELWAIQKE------
:::::::::::: :::::::: :::::::::::: :: ::::::: ::::::::: ::. :::::::::: :::::.: :::::::: ::::::.: ::::::: :::::::::: :::: ::::::::::::::::::::::::::::: ::: .:: :: ::::::::::: :::::: :::::::::::: ::::::::::::::::::::::
SNASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVAL----TR-DSDIFLR----LSERVKKAQ-EFD--ADLFISIHAD-TIDVHSL--RGATVYTI----SDEASDAI-AKSLAESENKVDLLDGLPKEESLELTDILLDLTRRETHAFSINFANNVVSNLSKSHINLIN-NPH--RYA-DF-QVLKAPDVPSV-LIEIGY--LSNKEDEKLLNNPQWRKQMAASIAYSIRQFAEYRQKIMQPL