Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1ajsa_sp3_TS5.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1ajsa_sp3_TS5.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1ajsA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.8191882 (Target length: 271, Aligned residues: 222)
RMSD: 4.84
TM-score: 0.56956
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
APPSV---FAE--VPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPW-V----LPVVR---K--V-------EQRIANNSSLNHEYLPILGLA--E-FRTCAS-RLALGDDSPALQEKRVGGVQSLGG-T-GALRIGA-E-FLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTP-EQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLL-PSGRI------N-MC-GLTTKNLDY--VATS--IHEA---VTKIQ--
. ..::::: :::::::: ::::..:: .:. . .:.:. . . ::::.... .::::::.:::: : :::::: ::::::::..:....::::::::: : ::::::: : :::::::. :: :::.: : :::: : ::::::..... : :::::::. : :::::: ::....:::. .::: :: ::::: . : ::: . : :::: :: .. . .. :. . . .:.:....:. .: : .::: :..:. . .: :::.... .. . .
-----MRLL--GTLTAVPLI--FSVYVAGE--------HGYLCPDA----EGITNTTYDEALVEESVTNACLPNSELSAAQLAANV-EAKKYPQVWVDSEDYGFNETVLLWKYQGNSSESLEESNVFVFTNNSCDILGLLQTSGDQYTICKGMKE--QN-EKKTS-------S-EIFS---D-EYENYYFDNYH----A-DEETQSFH-A---VRALNS---SNSKKTSKNSSSKIF-LF---------RKSSS--S---------S-SAR-----------S-S--------------ARSS----------AR--SS---------A---RS--SA------------R--S---------------------------------SSSSSSQNQQ--RR--K-----ASVYEKQSYAERQYINYEQLNDDTIFGE--YAEY--IFQ---DIRQ----NN