Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1ako__spk2_TS3.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1ako__spk2_TS3.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1ako (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.981982 (Target length: 111, Aligned residues: 109)
RMSD: 1.83
TM-score: 0.83901
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGD-M-NISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR
:::::::::::::::::::::::::::::::::::::: : :::::::::::::::::::::: ::: :::::::::::::::::: .:: ::::::::::.:: :::::::::::
-----------------------------------------------------------------------------------------------------------------MRFSNLAIIIYAARFISAASNYKTAHIEEERKGFICDGEYLSESKFRADRYQGQKDLKESKDN-LIG-AGELKELFESQQPDRLMM--YDN-GDAKEHYSWLIPS-LERESSRKSIC----------------------------------------