Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_2y7ca_spk2_TS5.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_2y7ca_spk2_TS5.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 2y7cA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.842233 (Target length: 412, Aligned residues: 347)
RMSD: 5.83
TM-score: 0.58262
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
MSAGKLPEGWV-IAPVSTVTTLI-RGVTYKKEQAINYLKDDYL---PLIRANNIQ----N---GKFDTTDLVFVPKNLVKESQKISPEDIVIAMSSGSKSVVGKSAHQHLPFECSFG---AFCGVL-RPEKLIFSGFIAHFTKSSLYRNKISSLSAGANINNIKPASFDLINIPIPPLAEQKIIAEKLDTL--L--A-QVDSTKARFEQIPQILK-RFR--QAVLGGAVNGKLTEKWRNFEPQHSVFKKLNFESI----------------LTELRNGLSSKPNESGVGHPILRISSVRAGHVDQN-----DIRFLECSESELNRHKLQDGD----LLFTRYNGSLEFVGVCGLLKKLQHQNLLYPDKLIRARLTKDALP------EYIE---IFF--SSPSARNAMMNCVKTTSGQKGISGKDIKSQVVLLPPVKEQAEIVRRVEQLFAYADTIEKQVNNALARVNNLTQSILAKAFRGELTAQWRAENPDLISGENSAAA-LLEKIKAER---AASGGKKAS-RKKS
     ....:: ::.::.::::: ::::::::..:::::::::   :::::::::    :   :::::::::::::::::::::::::::::::::::.  .:::::::::::::::   :::::: :::::::..:::: .:.::..:...  .:     ::: ..:::::...:. .:..:..::.:..  .  . .:::..:::::::...  ..   ..:....                                           ........  . ::::.  ...::......          .:::......    .....      ...::: :::: :::.. .        .:: ::...              .      .    ..:..::..::::.    ..::   ... . ...     .  ...:....::.::::::.:...:..::.::.:::::. : ::. ..       .  ...... ..:.::::.   ..:::...  .. .
-----MWINLCVTLSISWLILQVSCDNIPDSDMYLPDGTNGFVCDLDFYSIDHVREAAKKGVEAFFYKRKVDKFPKTFEDTQLYNVKSDILLSWPIISS--GLFYYRTPGNSRLIINTRGQIMGIVVISFQKPSHKISYN-KCIPVRRSLEE--NN-----KGQ-SLLNECWGLATP-TFGYNCGSKFFPKSILDKMIGPDAIKNYQQRLSGRN-KLS-CLIKYTGDE---------------------------FSGVDLYWYPLHQKLSDKRLAGPS--S-RFRVV--FDISNSEFKGI-----IDVENRNKKCVTVWD----VSSIS--SNNIYISSST-LNLD-KVGDG-H--------WPQ-TCFGH--------KLKSKIM---WLYL--EFALKYWMSTLNESNP----NLPL---TSQ-K-FIY-----S--WFIRPGETNKDSSNHVFAIAYNTKHNNYKLYLMKTRN-V-KVD-VH-------N--PCLEFSTDDIDRLRKHIGDKHNPEESL-SID-R