Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1ny5A_HHsearch_TS1.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1ny5A_HHsearch_TS1.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1ny5A (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 1.0 (Target length: 145, Aligned residues: 145)
RMSD: 0.58
TM-score: 0.98542
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
MNVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : ::::::::: ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
----------------------------------------------------------------------------------------------------------------------------------------VELIGRSEWINQYRRRLQQLSETDIAVWLYGAPGTGRMTGARYLHQFGRNAQGEFVYRELT-P-DNAPQLNDF-----------------IALAQGGTLVLSHPEHLTREQQYHLVQLQSQEH-----------RPFRLIGIGDTSLVELAASNHIIAELYYCFAMTQIACLPLT-------------------------------------------------------------------------