#!/bin/bash
#You will need to edit these paths to match your installation - see README_ModFOLDclustQ
export JAVA_HOME=/home/Liam/jdk1.5.0_06/
$JAVA_HOME/bin/java -jar ModFOLDclustQ.jar $1 $2 $3
sort -g -r -k +2 $3$1\_ModFOLDclustQ.unsort > $3$1\_ModFOLDclustQ.sort